From: Genetic susceptibility to hereditary non-medullary thyroid cancer
Gene | Chromosome | Study details | Reference |
---|---|---|---|
MAP2K5 | 15q23 | 34 families with two first-degree relatives with PTC (no syndromic FNMTC). Whole exome and target gene sequencing for candidate variants. | Ye et al. (2019) [86] |
PLCB1 | 20p12.3 | Genome wide linkage analysis and next generation sequencing performed in a family with MNG that was likely to progress to PTC as seen in some family members. An intronic PLCB1 InDel was found in all affected members. | Bakhsh et al. (2018) [87] |
BROX | 1q41 | Whole-exome sequencing of PTC patients from five families. Two BROX variants were observed in two of the families. | Pasquali et al. (2021) [88] |
POT1 | 7q31.33 | Whole exome sequencing of five affected family members with melanoma and thyroid cancer revealed a new mutation in POT1. POT1 is involved with the telomere shelterin complex that controls telomere protection. | Wilson et al. (2017) [89] |
A low frequency variant in POT1 was found in childhood cancer survivors that developed thyroid cancer. | Richard et al. (2020) [90] | ||
A POT1 variant causes telomere dysfunction in a family affected only by FNMTC. | Srivastava et al. (2020) [91] | ||
ATM | 11q22.3 | Whole-genome sequencing and genome-wide linkage analysis in 17 FNMTC families. ATM variant was identified in two families. | Wang et al. (2019) [92] |
CHEK2 | 22q12.1 | Whole-genome sequencing and genome-wide linkage analysis in 17 FNMTC families. A CHEK2 (breast and prostate cancer susceptibility gene) variant was identified in one family. | Wang et al. (2019) [92] |
NOP53 | 19q13.33 | Exome sequencing in a family with five cases of NSFNMTC and 44 additional families with FNMTC showed a low-penetrance germline variant of NOP53 with increased levels in tumour samples of the affected cases. | Orois et al. (2019) [93] |
NDUFA13/ GRIM-19 | 19p13.11 | A germline mutation was found in a patient with Hurthle cell PTC. No Grim-19 mutations were observed in familial Hurthle cell tumours. GRIM-19 is involved in mitochondrial metabolism. | Máximo et al. (2005) [94] |
TIMM44 | 19p13.2 | Screening of 14 candidate genes in the linkage region of affected TCO members from 8 FNMTC families. TIMM44 is a mitochondrial inner membrane translocase. | Bonora et al. (2006) [95] |
SRRM2 | 16p13.3 | Whole exome sequencing in a PTC family with six affected first- or second-degree relatives detected a germline variant in SRRM2. This gene is involved in RNA splicing, with aberrant alternative splicing in affected individuals. | Tomsic et al. (2015) [96] |
ANXA3 | 4q21.21 | Whole exome sequencing in three Brazilian families with familial PTC yielded seven new genes with implication in hereditary PTC. | Sarquis et al. (2020) [97] |
NTN4 | 12q22 | ||
SERPINA1 | 14q32.13 | ||
FKBP10 | 17q21.2 | ||
PLEKHG5 | 1p36.31 | ||
P2RX5 | 17p13.2 | ||
SAPCD1 | 6p21.33 | ||
Unknown | 8q24 (PTCSC1) | Genome wide linkage analysis in a large family with PTC and melanoma. | He et al. (2009) [98] |
Unknown | 4q32 | Linkage analysis and targeted deep sequencing identified an ultra-rare mutation (SNP) in chromosome 4q32 in a large pedigree affected by FNMTC. | He et al. (2013) [99] |
Unknown | 6q22 | Linkage analysis in 38 FNMTC families revealed, 6q22 (Maximum LOD of 3.3) displayed linkage. | Suh et al. (2009) [100] |
Unknown | 1q21 (fPTC,PRN) | Linkage analysis in a large three-generation familial PTC kindred, maximum LOD of + 3.58. | Malchoff et al. 2000) [101] |
Linkage analysis in forty-nine affected cases with FNMTC, maximum LOD of + 3.04. | Suh et al. (2009) [100] | ||
Unknown | 14q32 (MNG1) | Linkage analysis in a Canadian family with 18 cases of MNG (2 of which were also diagnosed with PTC). Maximum LOD of 3.8. | Bignell et al. (1997) [102] |
Unknown | 2q21 (NMTC1) | Linkage analysis in a large Tasmanian pedigree with PTC. Multipoint heterogeneity LOD of 3.07. | Mckay et al. (2001) [103] |
Linkage analysis in 10 FNMTC families. Linkage evident at both TCO and NMTC (LOD = 1.56 and 2.85, respectively) | Mckay et al. (2004) [104] | ||
Loss of heterozygosity (LOH) was analyzed at 2q21 and 19p13.2 in 9 FNMTC families. Two of the fourteen tumours displayed LOH at 2q21 (14%). | Prazeres et al. (2008) [105] | ||
Unknown | 8p23.1-p22 (FTEN) | Linkage analysis in a Portuguese family affected by PTC and benign thyroid lesions detected a linkage with 8p23.1-p22, Maximum haplotype-based LOD of 4.41. | Cavaco et al. (2008) [106] |
Unknown | 19q13.2 (TCO) | Linkage analysis in a French pedigree affected by PTC and MNG lead to mapping chromosome 19p13.2 to TCO (thyroid tumours with cell oxyphilia). Maximum LOD of 3.01. | Canzian et al. (1998) [107] |
Linkage analysis in one family with PTC and MNG. Maximum LOD of 1.54. | Bevan et al. (2001) [108] | ||
Linkage analysis in ten families affected by PTC and MNG. Maximum LOD of 1.56. | McKay et al. (2004) [104] | ||
Loss of heterozygosity (LOH) was analyzed at 19p13.2 in 9 FNMTC families. Eight of the fourteen tumours displayed LOH at 19p13.2 (57%). | Prazeres et al. (2008) [105] |