From: Germline mutations among Polish patients with acute myeloid leukemia
Gene | Mutation | Amino acid change | Exon/ Intron | Prediction by VarSome | Variant ID | Carriers n = 103 | Frequency in Europe (%) GnomAD | |
---|---|---|---|---|---|---|---|---|
CEBPA | c.179dupC | p.Ser61ValfsTer47 | Ex1 | pathogenic | COSM18632 | 1 | – | |
c.287_311del | p.Gly96AlafsTer56 | Ex1 | likely pathogenic | COSV57200088 | 1 | – | ||
c.402G > A | p.Ala134= | Ex1 | benign | rs752254340 COSV57196176 | 1 | 0.0 | ||
c.536T > C | p.Phe179Ser | Ex1 | VUS | – | 1 | – | ||
c.573 C > T | p.His191= | Ex1 | benign | rs192240793 COSV57200682 | 1 | 0.9 | ||
c.937_939dupAAG | p.Lys313dup | Ex1 | likely pathogenic | – | 1 | – | ||
GATA2 | c.919 C > T | p.Arg307Trp | Ex5 | likely pathogenic | COSM306052 | 1 | – | |
c.959G > A | p.Arg320His | Ex5 | likely pathogenic | rs121964985 COSM249854 | 1 | 0.1 | ||
c.1085G > A | p.Arg362Gln | Ex6 | likely pathogenic | rs867160952 COSM87004 | 1 | – | ||
ETV6 | c.463 + 49G > A | NA | Int4 | benign | rs17210957 | 8 | – | |
c.1090G > T | p.Glu364Ter | Ex6 | pathogenic | – | 1 | – | ||
DDX41 | c.409 A > G | p.Thr137Ala | Ex5 | VUS | – | 16 | – | |
TERT | c.835G > A | p.Ala279Thr | Ex2 | benign | rs61748181 COSM3760906 | 2 | 3.6 | |
c.915G > A | p.Ala305= | Ex2 | benign | rs2736098 COSM3760904 | 15 | 23.5 | ||
c.1573 + 39G > C | NA | Int2 | benign | rs79662648 | 2 | – | ||
c.1574-16G > C | NA | Int2 | benign | rs79698601 | 1 | 0.6 | ||
c.2007_2017del | p.Ala670ArgfsTer32 | Ex5 | pathogenic | – | 7 | – | ||
c.2018_2019insTT | p.Gly674SerfsTer41 | Ex5 | pathogenic | – | 7 | – | ||
c.2020G > A | p.Gly674Ser | Ex5 | VUS | rs773813809 COSM6919371 | 7 | 0.0 | ||
c.2023 C > T | p.Leu675Phe | Ex5 | VUS | – | 7 | – | ||
c.3184G > A | p.Ala1062Thr | Ex15 | benign | rs35719940 COSM5019566 | 1 | 2.2 | ||
c.3324G > A | p.Pro1108= | Ex16 | benign | rs35033501 COSM5020092 | 2 | 2.9 | ||
IDH2 | c.327G > A | p.Val109= | Ex3 | benign | rs150943639 COSM6867404 | 1 | 0.4 | |
c.404 C > A | p.Pro135His | Ex4 | likely pathogenic | – | 1 | – | ||
c.515G > T | p.Arg172Met | Ex4 | pathogenic | rs121913503 COSM33732 | 2 | – | ||
c.709 C > A | p.Gln237Lys | Ex6 | VUS | – | 6 | – |