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Table 3 Comparison between the most recent reports on the performance of inherited cancer panels

From: Evaluation of a 27-gene inherited cancer panel across 630 consecutive patients referred for testing in a clinical diagnostic laboratory

Study

Sample Size

Panel Size

Panel Positive Ratea

VUS Rate

Genes in common

Panel Non-BRCA positive ratea

Panel Non-LS positive ratea

Study Cohort

Current Study

630

27 genes

10.3%

32.7%

7.1%

8.1%

Prospective commercial laboratory cohort unselected for NCCN, or previous BRCA/LS testing tested on a panel that includes BRCA1/2 and LS genes

Lincoln, et al. 20157

735

29 genes

12.4%b

41.0%c

23

3.5%

11.3%

NCCN HBOC enriched clinical referral cohort tested on a panel that includes BRCA1/2 and LS genes

Yurgelun, et al. 20152

1260

25 genes

12.4%

38.0%

25

11.2%

3.3%

NCCN LS enriched cohort tested on a panel that includes BRCA1/2 and LS genes

Yurgelun et al. 20178

1058

25 genes

8.2%

31.2%

25

7.2%

5.1%

Unselected CRC care clinic based cohort tested on a panel that includes BRCA1/2 and LS genes

Ring, et al. 20169

381

25 genes

9.2%

26.0%

25

8.7%

3.4%

Society of gynecologic oncology criteria for endometrial cancer enriched cohort tested on a panel that includes BRCA1/2 and LS genes

Minion et al., 201510

911

21 genes

7.4%

27.1%

19

7.4%

5.9%

BRCA1/2 test negative cohort with a personal history of HBOC tested on a panel that includes BRCA1/2 and LS genes

Tung, et al. 201511,d

1781

25 genes

13.5%

41.7%

25

4.3%

13.1%

Commercial laboratory BRCA1/2 referral cohort tested on a panel that includes BRCA1/2 and LS genes

LaDuca, et al. 201412

425

22 genes

9.6%

23.5%

20

9.6%

7.8%

Commercial laboratory cohort tested on a cancer panel that did not include BRCA1/2 but included LS genes

LaDuca, et al. 201412

874

14 genes

7.4%

19.8%

12

7.4%

7.4%

Commercial laboratory high risk of HBOC selected cohort tested on a panel that did not include BRCA1/2 but included LS genes

Mannan, et al. 201613

141

13 genes

36.2%

14.8%

13

9.9%

36.2%

Unrelated patients and families with HBOC tested on a panel that did not include LS genes but included BRCA1/2

Susswein, et al. 201614,e

2056

29 genes

10.2%

34.7%

25

Not inferred

Not inferred

Commercial laboratory referral cohort tested on a panel that includes BRCA1/2 and LS genes

  1. aAll positive rates are calculated without including MUTYH carriers
  2. bPanel positive rate was calculated from Supplemental Table S9, Clinical Referral Cohort (n = 735)
  3. cVUS rate calculated from entire cohort, including Clinical Referral (n = 735), History enriched (n = 327)
  4. dPositive and VUS rate calculated from cohort 1
  5. eOnly 2056 patients were tested for the comprehensive 29 gene panel