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Table 4 Results for the ten CNVs associated with seven patients which affect genes previously associated with cancer

From: Expanding the genetic basis of copy number variation in familial breast cancer

Genes

Dx

Type

Chr

Start (bp)

End (bp)

Size (Kb)

FHIT

22

Loss

3

60,494,885

60,632,282

137.4

CARD11

37

Gain

7

2,946,394

2,996,375

50

FAM135B

38

Gain

8

139,259,837

139,306,535

46.7

ARHGEF12

51

Gain

11

119,697,081

119,723,342

26.3

TSHR

~49

Gain

14

80,659,512

80,669,166

9.7

MLLT11

46

Gain

1

149,289,549

149307059

17.5

CPD

Gain

17

25,700,671

25,756,973

56.3

RHOH

28

Gain

4

39,864,888

39,888,181

23.3

ARHGAP26

Gain

5

142,147,309

142,174,652

27.3

PTK2B

Gain

8

27,237,115

27,333,842

96.7

  1. Gene, age of patient diagnosis (Dx), CNV type (gain or loss), location (chromosome, start and end) and CNV size are indicated.