From: Mutation spectrum in South American Lynch syndrome families
Gene | Nucleotide | Consequence | Exon | Reported as | Country | Number of families | References |
---|---|---|---|---|---|---|---|
MLH1 | c.1-?_116 + ?del | p.M1_C39 > FfsX13 | 1 | Causal | Chile | 2 | InSIGHT |
c.199G > A | p.G67R | 2 | Causal | Argentina | 1 | InSIGHT | |
c.211G > T | p.E71X | 3 | Causal | Brazil | 1 | InSIGHT | |
c.289 T > G | p.Y97D | 3 | VUS | Uruguay | 1 | InSIGHT | |
C.336 T > A | p.H112Q | 4 | VUS | Argentina | 1 | InSIGHT | |
c.350C > T | p.T117M | 4 | Causal | Uruguay | 2 | InSIGHT | |
c.421C > G | p.P141A | 5 | VUS | Colombia | 1 | Giraldo et al. 2005 [2] | |
c.503dupA | p.N168KfsX4 | 6 | Causal | Chile | 1 | InSIGHT | |
c.503delAa | p.N168IfsX34 | 6 | Causal | Brazil | 1 | Not previously described | |
c.545 + 3A > G | 6 | Causal | Brazil | 2 | InSIGHT | ||
c.588 + 2 T > Aa | 7 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | ||
c.588 + 5G > C | 7 | Causal | Brazil | 1 | InSIGHT | ||
c.665delA | p.N222MfsX7 | 8 | Causal | Uruguay | 2 | InSIGHT | |
c.676C > T | p.R226X | 8 | Causal | Argentina | 1 | InSIGHT | |
c.677G > A | p.R226Q | 8 | Causal | Argentina, Brazil | 3 | InSIGHT | |
c.677 + 5G > A | 8 | Likely causal | Chile | 1 | French MMR network | ||
c.779 T > G | p.L260R | 9 | Causal | Brazil | 1 | InSIGHT | |
c.790 + 1G > A | 9 | Causal | Chile, Colombia | 3 | InSIGHT | ||
c.791-6_793delgtttagATCa | 10 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | ||
c.794G > C | p.R265P | 10 | VUS | Chile | 1 | InSIGHT | |
c.901C > T | p.Q301X | 11 | Causal | Chile | 1 | InSIGHT | |
c.1013A > Ga | p.N338S | 11 | VUS | Brazil | 1 | InSIGHT | |
c.1038 + 1G > Ta | p.Y347FfsX13 | 11 | Causal | Chile | 1 | Wielandt et al. 2012 | |
c.1039-8T_1558?896Tdupa | p.520Vfs564X | 12 to 13 | Causal | Colombia | 2 | Alonso-Espinaco et al. 2011 [11] | |
c.1276C > T | p.Q426X | 12 | Causal | Brazil | 3 | InSIGHT | |
c.1459C > T | p.R487X | 13 | Causal | Brazil | 1 | InSIGHT | |
c.1499_1501delTCAa | p.I500del | 13 | Causal | Brazil | 1 | Rossi et al. 2002 [5] | |
c.1558 + 1G > T | 13 | Causal | Brazil | 1 | InSIGHT | ||
c.1558 + 14G > A | 13 | VUS | Colombia | 2 | InSIGHT | ||
c.1559-2A > C | 13 | Causal | Chile | 1 | InSIGHT | ||
c.1559-?_1731 + ?del | p.V520_S577 > GfsX7b | 14 -15 | Causal | Chile | 1 | Wielandt et al. 2012 | |
c.1639_1643dup TTATAa | p.L549YfsX44 | 14 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | |
c.1690_1693delCTCA | p.L564FfsX26 | 15 | Causal | Brazil | 1 | InSIGHT | |
c.1724G > A | p.R575K | 15 | VUS | Argentina | 1 | InSIGHT | |
c.1731 + 3A > Ta | Skipping exon 15 | 15 | Causal | Chile | 1 | Alvarez et al. 2010 [6] | |
c.1846delAAG | p.K616del | 16 | Causal | Argentina | 1 | InSIGHT | |
c.1852_1853delinsGC | p.K618A | 16 | Causal | Argentina | 1 | InSIGHT | |
c.1852_1854 delAAG | p.K618del | 16 | Causal | Argentina | 1 | InSIGHT | |
c.1853A > C | p.K618T | 16 | VUS | Brazil | 1 | InSIGHT | |
c.1853delAinsTTCTTa | p.K618IfsX4 | 16 | Causal | Brazil | 2 | Valentin et al. 2011 [3] | |
c.1856delGa | 16 | Causal | Colombia | 2 | Giraldo et al. 2005 [2] | ||
c.1890dupa | p.D631fsX1 | 16 | Causal | Argentina | 1 | Valentin et al. 2011 [3] | |
c.1897-?_1989 + ?dela | 17-19 | Causal | Brazil | 1 | Not previously described | ||
c.1918C > T | p.P640T | 17 | VUS | Colombia | 1 | InSIGHT | |
c.1975C > T | p.R659X | 17 | Causal | Brazil | 1 | InSIGHT | |
c.1998G > A | p.W666X | 18 | Causal | Brazil | 1 | Rossi et al. 2012 [5] | |
c.2027 T > C | p.L676P | 18 | Causal | Brazil | 1 | InSIGHT | |
c.2041G > A | p.A681T | 18 | Likely causal | Chile, Brazil, Colombia | 4 | French MMR network | |
c.2092_2093delTC | p.S698RfsX5 | 18 | Causal | Chile | 1 | Alvarez et al. 2010 [6] | |
c.2224C > Ta | p.Q742X | 19 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | |
c.2252_2253dupAA | p.V752KfsX26 | 19 | VUS | Brazil | 1 | InSIGHT | |
c.2104-?_2271 + ?delb | p.S702_X757del | 19 | Causal | Chile | 2 | Wielandt et al. 2012 | |
MSH2 | c.71delAa | p.Q24fs | 1 | Causal | Brazil | 1 | Not previously described |
c.166G > Ta | p.E56X | 1 | Causal | Argentina | 1 | InSIGHT | |
c.174dupCa | 1 | Causal | Brazil | 1 | Not previously described | ||
c.175dupCa | p.K59QfsX23 | 1 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | |
c.181C > Ta | p.Q61X | 1 | Causal | Uruguay | 1 | Sarroca et al. 2003 | |
c.187delG | p.V63fsX1 | 1 | Causal | Brazil | 1 | InSIGHT | |
c.289C > T | p.Q97X | 2 | Causal | Argentina | 1 | InSIGHT | |
c.212-?_366 + ?del | p.A72_K122 > FfsX9 | 2 | Causal | Chile | 1 | InSIGHT | |
c.388_389delCA | p.Q130VfsX2 | 3 | Causal | Brazil, Argentina | 2 | InSIGHT | |
c.530_531delAAa | p.E177fsX3 | 3 | Causal | Uruguay | 1 | Sarroca et al. 2003 | |
c.596delTGa | 3 | Causal | Colombia | 1 | Giraldo et al. 2005 [2] | ||
c.862C > T | p.Q287X | 5 | Causal | Brazil | 1 | InSIGHT | |
c.897 T > G | p.Y299X | 5 | Causal | Chile | 1 | Wielandt et al. 2012 | |
c.942 + 3 A > T | 5 | Causal | Brazil | 1 | InSIGHT | ||
c.1077-?_1276 + ?del | p.L360KfsX16 | 7 | Causal | Argentina | 1 | InSIGHT | |
c.1147C > T | p.R382X | 7 | Causal | Brazil | 1 | InSIGHT | |
c.1215C > A | p.Y405X | 7 | Causal | Chile | 1 | InSIGHT | |
c.1216C > T | p.R406X | 7 | Causal | Uruguay | 1 | InSIGHT | |
c.1249delG | p.V417LfsX21 | 7 | Causal | Brazil | 1 | InSIGHT | |
c.1255C > T | p.Q419X | 7 | Causal | Brazil | 1 | InSIGHT | |
c.1444A > Ta | p.R482X | 9 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | |
c.1447G > T | p.E483X | 9 | Causal | Brazil | 2 | InSIGHT | |
c.1667delTa | p.L556X | 11 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | |
c.1667_1668insAa | p.T557DfsX5 | 11 | Causal | Brazil | 1 | Rossi et al. 2002 [5] | |
c.1910delCa | p.R638GfsX47 | 12 | Causal | Argentina | 1 | Vaccaro et al. 2007 | |
c.1967_1970dupACTTa | p.F657LfsX3 | 12 | Causal | Brazil | 1 | Valentin et al. 2011 [3] | |
c.2038C > T | p.R680X | 13 | Causal | Chile | 1 | InSIGHT | |
c.2046_2047delTGa | p.V684Dfs*14 | 13 | Causal | Argentina | 1 | InSIGHT | |
c.2131C > T | p.R711X | 13 | Causal | Brazil | 1 | InSIGHT | |
c.2152C > T | p.Q718X | 13 | Causal | Brazil | 6 | InSIGHT | |
c.2185_2192del7insCCCTa | p.M729_E731delinsP729_X730 | 13 | Causal | Chile | 1 | Alvarez et al. 2010 [6] | |
c.2187G > Ta | p.M729I | 13 | VUS | Brazil | 1 | Valentin et al. 2011 [3] | |
c.2525_2526delAGa | p.E842VfsX3 | 15 | Causal | Brazil | 2 | Valentin et al. 2011 [3] | |
c.2785C > Ta | p.R929X | 16 | Causal | Brazil | 1 | Valentin et al. 2011 [3] |